HyPar
1.0
Finite-Difference Hyperbolic-Parabolic PDE Solver on Cartesian Grids
|
Structure containing all solver-specific variables and functions. More...
#include <hypar.h>
Data Fields | |
int | ndims |
int | nvars |
int * | dim_global |
int * | dim_local |
int | npoints_global |
int | npoints_local |
int | npoints_local_wghosts |
int | ndof_nodes |
int | ndof_cells_wghosts |
int | size_x |
int | ghosts |
int | n_iter |
int | restart_iter |
int | my_idx |
int | nsims |
double | dt |
int * | dim_global_ex |
char | time_scheme [_MAX_STRING_SIZE_] |
char | time_scheme_type [_MAX_STRING_SIZE_] |
char | spatial_scheme_hyp [_MAX_STRING_SIZE_] |
char | interp_type [_MAX_STRING_SIZE_] |
char | SplitHyperbolicFlux [_MAX_STRING_SIZE_] |
char | spatial_type_par [_MAX_STRING_SIZE_] |
char | spatial_scheme_par [_MAX_STRING_SIZE_] |
int * | index |
double * | x |
double * | dxinv |
double * | u |
double * | hyp |
double * | par |
double * | source |
double * | fluxC |
double * | uC |
double * | fluxI |
double * | uL |
double * | uR |
double * | fL |
double * | fR |
double * | Deriv1 |
double * | Deriv2 |
int | nBoundaryZones |
void * | boundary |
int * | isPeriodic |
void * | time_integrator |
int | screen_op_iter |
int | file_op_iter |
int | write_residual |
char | input_mode [_MAX_STRING_SIZE_] |
char | ip_file_type [_MAX_STRING_SIZE_] |
char | output_mode [_MAX_STRING_SIZE_] |
char | op_file_format [_MAX_STRING_SIZE_] |
char | op_overwrite [_MAX_STRING_SIZE_] |
char | plot_solution [_MAX_STRING_SIZE_] |
char * | filename_index |
int | index_length |
char | solnfilename_extn [_MAX_STRING_SIZE_] |
char | plotfilename_extn [_MAX_STRING_SIZE_] |
char | op_fname_root [_MAX_STRING_SIZE_] |
char | aux_op_fname_root [_MAX_STRING_SIZE_] |
int(* | WriteOutput )(int, int, int *, double *, double *, char *, int *) |
int(* | ApplyBoundaryConditions )(void *, void *, double *, double *, double) |
int(* | ApplyIBConditions )(void *, void *, double *, double) |
int(* | TimeIntegrate )(void *) |
int(* | InterpolateInterfacesHyp )(double *, double *, double *, double *, int, int, void *, void *, int) |
int(* | NonlinearInterp )(double *, void *, void *, double, int(*)(double *, double *, int, void *, double)) |
int(* | SetInterpLimiterVar )(double *, double *, double *, int, void *, void *) |
int(* | InterpolateInterfacesPar )(double *, double *, int, void *, void *) |
int(* | FirstDerivativePar )(double *, double *, int, int, void *, void *) |
int(* | SecondDerivativePar )(double *, double *, int, void *, void *) |
int(* | HyperbolicFunction )(double *, double *, void *, void *, double, int, int(*)(double *, double *, int, void *, double), int(*)(double *, double *, double *, double *, double *, double *, int, void *, double)) |
int(* | ParabolicFunction )(double *, double *, void *, void *, double) |
int(* | SourceFunction )(double *, double *, void *, void *, double) |
char | model [_MAX_STRING_SIZE_] |
void * | physics |
double(* | ComputeCFL )(void *, void *, double, double) |
double(* | ComputeDiffNumber )(void *, void *, double, double) |
int(* | FFunction )(double *, double *, int, void *, double) |
int(* | dFFunction )(double *, double *, int, void *, double) |
int(* | FdFFunction )(double *, double *, int, void *, double) |
int | flag_fdf_specified |
int(* | Upwind )(double *, double *, double *, double *, double *, double *, int, void *, double) |
int(* | UpwinddF )(double *, double *, double *, double *, double *, double *, int, void *, double) |
int(* | UpwindFdF )(double *, double *, double *, double *, double *, double *, int, void *, double) |
int(* | GFunction )(double *, double *, int, void *, double) |
int(* | HFunction )(double *, double *, int, int, void *, double) |
int(* | SFunction )(double *, double *, void *, void *, double) |
int(* | UFunction )(double *, double *, int, void *, void *, double) |
int(* | JFunction )(double *, double *, void *, int, int, int) |
int(* | KFunction )(double *, double *, void *, int, int) |
int(* | PreStage )(int, double **, void *, void *, double) |
int(* | PostStage )(double *, void *, void *, double) |
int(* | PreStep )(double *, void *, void *, double) |
int(* | PostStep )(double *, void *, void *, double, int) |
int(* | PrintStep )(void *, void *, double) |
int(* | PhysicsOutput )(void *, void *, double) |
int(* | PhysicsInput )(void *, void *, int, int, int *) |
int(* | AveragingFunction )(double *, double *, double *, void *) |
int(* | GetLeftEigenvectors )(double *, double *, void *, int) |
int(* | GetRightEigenvectors )(double *, double *, void *, int) |
void * | interp |
void * | compact |
void * | msti |
void * | lusolver |
double | error [3] |
double * | ConservationError |
char | ConservationCheck [_MAX_STRING_SIZE_] |
double * | VolumeIntegral |
double * | VolumeIntegralInitial |
double * | StageBoundaryIntegral |
double * | StepBoundaryIntegral |
double * | TotalBoundaryIntegral |
int(* | VolumeIntegralFunction )(double *, double *, void *, void *) |
int(* | BoundaryIntegralFunction )(void *, void *) |
int(* | CalculateConservationError )(void *, void *) |
int | use_petscTS |
double * | u0 |
double * | uref |
double * | rhsref |
double * | rhs |
double * | u_rom_predicted |
double | rom_diff_norms [3] |
char | op_rom_fname_root [_MAX_STRING_SIZE_] |
int | flag_nonlinearinterp |
int * | stride_with_ghosts |
int * | stride_without_ghosts |
int | count_hyp |
int | count_par |
int | count_sou |
int | count_RHSFunction |
int | count_IFunction |
int | count_IJacobian |
int | count_RHSJacobian |
int | count_IJacFunction |
int | count_RHSJacFunction |
double * | iblank |
char | ib_filename [_MAX_STRING_SIZE_] |
int | flag_ib |
void * | ib |
int(* | IBFunction )(void *, void *, double *, double) |
int | use_gpu |
int | gpu_device_no |
int | gpu_npoints_boundary_offset [3] |
int | gpu_npoints_boundary [3] |
int * | gpu_dim_local |
double * | gpu_iblank |
double * | gpu_x |
double * | gpu_dxinv |
double * | gpu_u |
int | StageBoundaryBuffer_size |
double * | StageBoundaryBuffer |
void * | py_plt_func |
void * | py_plt_func_args |
Structure containing all solver-specific variables and functions.
This structure contains all the variables and function pointers for the main PDE solver.
int ndims |
int nvars |
int* dim_global |
Global dimensions: array of size HyPar::ndims containing the global grid size in each spatial/coordinate dimension (input - solver.inp )
int* dim_local |
Local dimensions: array of size HyPar::ndims containing the local grid size in each spatial/coordinate dimension (computed, based on the number of processors)
int npoints_global |
int npoints_local |
int npoints_local_wghosts |
Local number of grid points with ghost points (product of the [elements of dim_local + 2*HyPar::ghosts])
int ndof_nodes |
int ndof_cells_wghosts |
int ghosts |
int restart_iter |
int my_idx |
int nsims |
int* dim_global_ex |
Global dimensions of exact solution, if available: if an exact/reference solution is available to compute errors, this array of size HyPar::ndims contains its global grid size in each spatial/coordinate dimension. By default, it is the same as HyPar::dim_global, unless specified otherwise in solver.inp
char time_scheme[_MAX_STRING_SIZE_] |
char time_scheme_type[_MAX_STRING_SIZE_] |
char spatial_scheme_hyp[_MAX_STRING_SIZE_] |
char interp_type[_MAX_STRING_SIZE_] |
char SplitHyperbolicFlux[_MAX_STRING_SIZE_] |
char spatial_type_par[_MAX_STRING_SIZE_] |
char spatial_scheme_par[_MAX_STRING_SIZE_] |
int* index |
a HyPar::ndims-dimensional integer array used to reference grid points
double* x |
the coordinate vector: one 1D array containing the spatial coordinates along each dimension of the grid points, one dimension after the other. Use _GetCoordinate_ to access the spatial coordinate at a specific grid point
double* dxinv |
double* u |
Solution vector: the HyPar::ndims-dimensional solution vector with nvars components at each grid point is stored as a 1D array. Includes ghost points Use _ArrayIndex1D_ to calculate the index in the 1D array corresponding to a HyPar::ndims-dimensional index (i_0, i_1, i_2, ..., i_{ndims-1})
double* hyp |
double* par |
double* source |
double* fluxC |
double* uC |
double* fluxI |
double* uL |
double * uR |
double * fL |
double * fR |
double* Deriv1 |
arrays to hold approximations to the first and second derivatives to a given function at grid points. Layout is same as u, hyp, par, source. Includes ghost points Array to hold approximations to the first derivative to a given function at grid points. Layout is same as u, hyp, par, source. Includes ghost points
double * Deriv2 |
int nBoundaryZones |
void* boundary |
Pointer to the boundary zones: boundary zone type is defined in boundaryconditions.h
int* isPeriodic |
Pointer to array of size HyPar::ndims: each element is 1 if the domain is periodic along that spatial dimension; zero otherwise.
void* time_integrator |
int screen_op_iter |
int file_op_iter |
int write_residual |
char input_mode[_MAX_STRING_SIZE_] |
char ip_file_type[_MAX_STRING_SIZE_] |
char output_mode[_MAX_STRING_SIZE_] |
char op_file_format[_MAX_STRING_SIZE_] |
char op_overwrite[_MAX_STRING_SIZE_] |
char plot_solution[_MAX_STRING_SIZE_] |
char* filename_index |
int index_length |
char solnfilename_extn[_MAX_STRING_SIZE_] |
char plotfilename_extn[_MAX_STRING_SIZE_] |
char op_fname_root[_MAX_STRING_SIZE_] |
char aux_op_fname_root[_MAX_STRING_SIZE_] |
int(* WriteOutput)(int, int, int *, double *, double *, char *, int *) |
Pointer to the function to write the solution to file, assigned in InitializeSolvers()
int(* ApplyBoundaryConditions)(void *, void *, double *, double *, double) |
Pointer to the function to apply the physical boundary conditions to the solution, assigned in InitializeSolvers()
int(* ApplyIBConditions)(void *, void *, double *, double) |
Pointer to the function to apply the immersed boundary conditions to the solution, assigned in InitializeSolvers()
int(* TimeIntegrate)(void *) |
Pointer to the function to integrate the solution in time, assigned in InitializeSolvers()
int(* InterpolateInterfacesHyp)(double *, double *, double *, double *, int, int, void *, void *, int) |
Pointer to the function to interpolate a function at the grid interfaces from the cell-centered values for the hyperbolic flux, assigned in InitializeSolvers()
int(* NonlinearInterp)(double *, void *, void *, double, int(*)(double *, double *, int, void *, double)) |
Pointer to the function to pre-calculate the nonlinear interpolation coefficients for the hyperbolic flux interpolation, assigned in InitializeSolvers()
int(* SetInterpLimiterVar)(double *, double *, double *, int, void *, void *) |
Pointer to the function to calculate the non-linear interpolation coefficients of the given scheme, assigned by the initialization function of the non-linear interpolation method (eg. WENOInitialize() )
int(* InterpolateInterfacesPar)(double *, double *, int, void *, void *) |
Pointer to the function to interpolate a function at the grid interfaces from the cell-centered values for the parabolic flux (needed for a conservative 1-stage discretization), assigned in InitializeSolvers()
int(* FirstDerivativePar)(double *, double *, int, int, void *, void *) |
Pointer to the function to calculate the cell-centered first derivative of a given function, for the evaluation of the parabolic term; assigned in InitializeSolvers()
int(* SecondDerivativePar)(double *, double *, int, void *, void *) |
Pointer to the function to calculate the cell-centered second derivative of a given function, for the evaluation of the parabolic term; assigned in InitializeSolvers()
int(* HyperbolicFunction)(double *, double *, void *, void *, double, int, int(*)(double *, double *, int, void *, double), int(*)(double *, double *, double *, double *, double *,double *, int, void *, double)) |
Pointer to the function to calculate the hyperbolic term (assigned in InitializeSolvers())
int(* ParabolicFunction)(double *, double *, void *, void *, double) |
Pointer to the function to calculate the parabolic term (assigned in InitializeSolvers())
int(* SourceFunction)(double *, double *, void *, void *, double) |
Pointer to the function to calculate the source term (assigned in InitializeSolvers())
char model[_MAX_STRING_SIZE_] |
void* physics |
double(* ComputeCFL)(void *, void *, double, double) |
Pointer to the function to calculate the CFL number (assigned in the physical model initialization called from InitializePhysics())
double(* ComputeDiffNumber)(void *, void *, double, double) |
Pointer to the function to calculate the diffusion number (assigned in the physical model initialization called from InitializePhysics())
int(* FFunction)(double *, double *, int, void *, double) |
Pointer to the function to calculate the hyperbolic flux function (assigned in the physical model initialization called from InitializePhysics())
int(* dFFunction)(double *, double *, int, void *, double) |
If hyperbolic flux is split as \(f\left(u\right) = \left[f\left(u\right)-df\left(u\right)\right] + df\left(u\right)\) (see HyPar::SplitHyperbolicFlux), function to calculate \(df\left(u\right)\) (assigned in the physical model initialization called from InitializePhysics())
int(* FdFFunction)(double *, double *, int, void *, double) |
If hyperbolic flux is split as \(f\left(u\right) = \left[f\left(u\right)-df\left(u\right)\right] + df\left(u\right)\), (see HyPar::SplitHyperbolicFlux), function to calculate \(\left[f-df\right]\left(u\right)\)(assigned in the physical model initialization called from InitializePhysics()) .
Specifying this is optional; if the physical model does not explicitly specify this, then it is computed by subtracting HyPar::dFFunction() from HyPar::FFunction().
int flag_fdf_specified |
Flag indicating whether the physical model has explicitly specified the function to compute \(\left[f-df\right]\left(u\right)\) (HyPar::FdFFunction()) or not. Relevant if the hyperbolic flux is being partitioned.
int(* Upwind)(double *, double *, double *, double *, double *, double *, int, void *, double) |
Pointer to the function to calculate the upwind interface flux, given the left- and right-biased fluxes (assigned in the physical model initialization called from InitializePhysics())
int(* UpwinddF)(double *, double *, double *, double *, double *, double *, int, void *, double) |
Pointer to the function to calculate the upwind interface split flux \(df\left(u\right)\), given the left- and right-biased approximations (assigned in the physical model initialization called from InitializePhysics()). Relevant only if the hyperbolic flux is being partitioned as \(f\left(u\right) = \left[f\left(u\right)-df\left(u\right)\right] + df\left(u\right)\)
int(* UpwindFdF)(double *, double *, double *, double *, double *, double *, int, void *, double) |
Pointer to the function to calculate the upwind interface split flux \(\left[f-df\right]\left(u\right)\), given its left- and right-biased approximations (assigned in the physical model initialization called from InitializePhysics()). Relevant only if the hyperbolic flux is being partitioned as \(f\left(u\right) = \left[f\left(u\right)-df\left(u\right)\right] + df\left(u\right)\) (see HyPar::SplitHyperbolicFlux, HyPar::dFFunction()), and if the split part \(\left[f-df\right]\left(u\right)\) is being specified explicitly (see HyPar::FdFFunction(), HyPar::flag_fdf_specified).
int(* GFunction)(double *, double *, int, void *, double) |
Pointer to the function to calculate the parabolic function with no cross-derivatives (assigned in the physical model initialization called from InitializePhysics())
int(* HFunction)(double *, double *, int, int, void *, double) |
Pointer to the function to calculate the parabolic function with cross-derivatives (assigned in the physical model initialization called from InitializePhysics())
int(* SFunction)(double *, double *, void *, void *, double) |
Pointer to the function to calculate the source function (assigned in the physical model initialization called from InitializePhysics())
int(* UFunction)(double *, double *, int, void *, void *, double) |
Pointer to the function to calculate the modified solution for upwinding (assigned in the physical model initialization called from InitializePhysics())
int(* JFunction)(double *, double *, void *, int, int, int) |
Pointer to the function to calculate the flux Jacobian for a given solution state (assigned in the physical model initialization called from InitializePhysics()). The advective flux Jacobian is the Jacobian of the analytical (not spatially discretized) advective flux for a given solution state (for example, at a grid point). The size is (HyPar::nvars)^2 and the matrix is stored as a 1D array in row-major format.
int(* KFunction)(double *, double *, void *, int, int) |
Pointer to the function to calculate the diffusion term Jacobian for a given solution state (assigned in the physical model initialization called from InitializePhysics()). The diffusion Jacobian is the Jacobian of the analytical (not spatially discretized) diffusion term for a given solution state (for example, at a grid point). The size is (HyPar::nvars)^2 and the matrix is stored as a 1D array in row-major format.
int(* PreStage)(int, double **, void *, void *, double) |
Pointer to the function to do some pre-time-integration-stage computations, if required (assigned in the physical model initialization called from InitializePhysics())
int(* PostStage)(double *, void *, void *, double) |
Pointer to the function to do some post-time-integration-stage computations, if required (assigned in the physical model initialization called from InitializePhysics())
int(* PreStep)(double *, void *, void *, double) |
Pointer to the function to do some pre-time-integration-step computations, if required (assigned in the physical model initialization called from InitializePhysics())
int(* PostStep)(double *, void *, void *, double, int) |
Pointer to the function to do some post-time-integration-step computations, if required (assigned in the physical model initialization called from InitializePhysics())
int(* PrintStep)(void *, void *, double) |
Pointer to the function to print some physics-specific time-integration-step information, if required (assigned in the physical model initialization called from InitializePhysics())
int(* PhysicsOutput)(void *, void *, double) |
Pointer to the function to write (to file) physics-related data that may not be a part of the solution (assigned in the physical model initialization called from InitializePhysics())
int(* PhysicsInput)(void *, void *, int, int, int *) |
Pointer to the function to read (from file) physics-related data that may not be a part of the solution (assigned in the physical model initialization called from InitializePhysics())
int(* AveragingFunction)(double *, double *, double *, void *) |
Pointer to the function to calculate the averaged solution state, given two solution states (assigned in the physical model initialization called from InitializePhysics())
int(* GetLeftEigenvectors)(double *, double *, void *, int) |
Pointer to the function to calculate the left eigenvectors of the flux Jacobian for a given solution state (assigned in the physical model initialization called from InitializePhysics())
int(* GetRightEigenvectors)(double *, double *, void *, int) |
Pointer to the function to calculate the right eigenvectors of the flux Jacobian for a given solution state (assigned in the physical model initialization called from InitializePhysics())
void* interp |
void* compact |
void* msti |
void* lusolver |
double error[3] |
double* ConservationError |
char ConservationCheck[_MAX_STRING_SIZE_] |
double* VolumeIntegral |
double* VolumeIntegralInitial |
double* StageBoundaryIntegral |
double* StepBoundaryIntegral |
double* TotalBoundaryIntegral |
int(* VolumeIntegralFunction)(double *, double *, void *, void *) |
int(* BoundaryIntegralFunction)(void *, void *) |
int(* CalculateConservationError)(void *, void *) |
double rom_diff_norms[3] |
char op_rom_fname_root[_MAX_STRING_SIZE_] |
int flag_nonlinearinterp |
int* stride_with_ghosts |
int* stride_without_ghosts |
int count_hyp |
int count_par |
int count_RHSFunction |
int count_RHSJacobian |
int count_IJacFunction |
int count_RHSJacFunction |
double* iblank |
blanking array: of same size and layout as HyPar::u (but with 1 component per grid point, it has a value 1 for all valid grid points and 0 for grid points that are blanked out. It is essentially an integer array, but the declared as a double type to use functions defined for the double data type.
char ib_filename[_MAX_STRING_SIZE_] |
int flag_ib |
int(* IBFunction)(void *, void *, double *, double) |
Physics-specific immersed boundary treatment function (assigned in the physical model initialization called from InitializePhysics())
int gpu_npoints_boundary_offset[3] |
int* gpu_dim_local |
A copy of HyPar::dim_local on GPU
double* gpu_iblank |
A copy of HyPar::iblank on GPU
double* gpu_dxinv |
A copy of HyPar::dxinv on GPU
int StageBoundaryBuffer_size |
size of HyPar::StageBoundaryBuffer
void* py_plt_func_args |